IL_3JBO_192

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUAU*AUACA

Length

9 nucleotides

Bulged bases

3JBO|1|AA|U|3361, 3JBO|1|AA|C|3378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AA|U|3360
3JBO|1|AA|U|3361
3JBO|1|AA|A|3362
3JBO|1|AA|U|3363
*
3JBO|1|AA|A|3375
3JBO|1|AA|U|3376
3JBO|1|AA|A|3377
3JBO|1|AA|C|3378
3JBO|1|AA|A|3379

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain AE

60S ribosomal protein uL3

Chain AK

60S ribosomal protein uL13