IL_3JBO_222

3D structure

PDB id

3JBO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

AAAA*UGACUGAAU

Length

13 nucleotides

Bulged bases

3JBO|1|AC|C|86, 3JBO|1|AC|G|90

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBO|1|AC|A|73
3JBO|1|AC|A|74
3JBO|1|AC|A|75
3JBO|1|AC|A|76
*
3JBO|1|AC|U|83
3JBO|1|AC|G|84
3JBO|1|AC|A|85
3JBO|1|AC|C|86
3JBO|1|AC|U|89
3JBO|1|AC|G|90
3JBO|1|AC|A|91
3JBO|1|AC|A|92
3JBO|1|AC|U|93

Current chains

Chain AC

5.8S ribosomal RNA

Nearby chains

Chain A3

60S ribosomal protein uL29

Chain AA

Large subunit ribosomal RNA; LSU rRNA

Chain AZ

60S ribosomal protein uL24

Chain Ac

60S ribosomal protein eL37