3D structure

PDB id
3JBO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
5.8 Å

Loop

Sequence
GUUUGG*CCUUUC
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JBO|1|AA|G|130
3JBO|1|AA|U|131
3JBO|1|AA|U|132
3JBO|1|AA|U|133
3JBO|1|AA|G|134
3JBO|1|AA|G|135
*
3JBO|1|AA|C|142
3JBO|1|AA|C|143
3JBO|1|AA|U|144
3JBO|1|AA|U|145
3JBO|1|AA|U|146
3JBO|1|AA|C|147

Current chains

Chain AA
28S ribosomal RNA

Nearby chains

Chain A3
60S ribosomal protein uL29
Chain AY
60S ribosomal protein uL23
Chain Ac
60S ribosomal protein eL37

Coloring options:

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