IL_3JBP_024

3D structure

PDB id

3JBP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GGUG*CAGAGUAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBP|1|A|G|521
3JBP|1|A|G|522
3JBP|1|A|U|523
3JBP|1|A|G|524
*
3JBP|1|A|C|542
3JBP|1|A|A|543
3JBP|1|A|G|544
3JBP|1|A|A|545
3JBP|1|A|G|546
3JBP|1|A|U|547
3JBP|1|A|A|548
3JBP|1|A|A|549
3JBP|1|A|C|550

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain 6

40S ribosomal protein eS30

Chain E

40S ribosomal protein uS4