IL_3JBP_109

3D structure

PDB id

3JBP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

AGAUUUG*CUUUGCAU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBP|1|AA|A|827
3JBP|1|AA|G|828
3JBP|1|AA|A|829
3JBP|1|AA|U|830
3JBP|1|AA|U|831
3JBP|1|AA|U|832
3JBP|1|AA|G|833
*
3JBP|1|AA|C|861
3JBP|1|AA|U|862
3JBP|1|AA|U|863
3JBP|1|AA|U|864
3JBP|1|AA|G|865
3JBP|1|AA|C|866
3JBP|1|AA|A|867
3JBP|1|AA|U|868

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain A4

60S ribosomal protein eL29

Chain AS

60S ribosomal protein eL18