IL_3JBP_170

3D structure

PDB id

3JBP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

UCAACU*AUCAAG

Length

12 nucleotides

Bulged bases

3JBP|1|AA|C|2524

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBP|1|AA|U|2504
3JBP|1|AA|C|2505
3JBP|1|AA|A|2506
3JBP|1|AA|A|2507
3JBP|1|AA|C|2508
3JBP|1|AA|U|2509
*
3JBP|1|AA|A|2522
3JBP|1|AA|U|2523
3JBP|1|AA|C|2524
3JBP|1|AA|A|2525
3JBP|1|AA|A|2526
3JBP|1|AA|G|2527

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain 7

Transfer RNA; tRNA

Chain AD

60S ribosomal protein uL2

Chain Ab

60S ribosomal protein eL36