IL_3JBP_206

3D structure

PDB id

3JBP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

AAAUUAUAUA*UAAAUAAU

Length

18 nucleotides

Bulged bases

3JBP|1|AA|A|3584, 3JBP|1|AA|A|3590, 3JBP|1|AA|U|3616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBP|1|AA|A|3583
3JBP|1|AA|A|3584
3JBP|1|AA|A|3585
3JBP|1|AA|U|3586
3JBP|1|AA|U|3587
3JBP|1|AA|A|3588
3JBP|1|AA|U|3589
3JBP|1|AA|A|3590
3JBP|1|AA|U|3591
3JBP|1|AA|A|3592
*
3JBP|1|AA|U|3612
3JBP|1|AA|A|3613
3JBP|1|AA|A|3614
3JBP|1|AA|A|3615
3JBP|1|AA|U|3616
3JBP|1|AA|A|3617
3JBP|1|AA|A|3618
3JBP|1|AA|U|3619

Current chains

Chain AA

28S ribosomal RNA

Nearby chains

Chain AH

60S ribosomal protein uL6

Chain AI

60S ribosomal protein eL6

Chain AK

60S ribosomal protein uL13

Chain AN

60S ribosomal protein eL14

Chain AU

60S ribosomal protein eL20