IL_3JBU_012

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GAUUAGC*GCGACGAUC

Length

16 nucleotides

Bulged bases

3JBU|1|A|U|244, 3JBU|1|A|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|242
3JBU|1|A|A|243
3JBU|1|A|U|244
3JBU|1|A|U|245
3JBU|1|A|A|246
3JBU|1|A|G|247
3JBU|1|A|C|248
*
3JBU|1|A|G|276
3JBU|1|A|C|277
3JBU|1|A|G|278
3JBU|1|A|A|279
3JBU|1|A|C|280
3JBU|1|A|G|281
3JBU|1|A|A|282
3JBU|1|A|U|283
3JBU|1|A|C|284

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain Q

30S ribosomal protein S17