IL_3JBU_016
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- CGG*CG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBU_016 not in the Motif Atlas
- Geometric match to IL_5TBW_375
- Geometric discrepancy: 0.3083
- The information below is about IL_5TBW_375
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
3JBU|1|A|C|443
3JBU|1|A|G|444
3JBU|1|A|G|445
*
3JBU|1|A|C|490
3JBU|1|A|G|491
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
Coloring options: