IL_3JBU_071

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CCGAAAC*GAGAUAGCUG

Length

17 nucleotides

Bulged bases

3JBU|1|b|G|801, 3JBU|1|b|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|C|672
3JBU|1|b|C|673
3JBU|1|b|G|674
3JBU|1|b|A|675
3JBU|1|b|A|676
3JBU|1|b|A|677
3JBU|1|b|C|678
*
3JBU|1|b|G|799
3JBU|1|b|A|800
3JBU|1|b|G|801
3JBU|1|b|A|802
3JBU|1|b|U|803
3JBU|1|b|A|804
3JBU|1|b|G|805
3JBU|1|b|C|806
3JBU|1|b|U|807
3JBU|1|b|G|808

Current chains

Chain b

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4

Chain l

50S ribosomal protein L15