IL_3JBU_108
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GAGAAC*GAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBU_108 not in the Motif Atlas
- Geometric match to IL_5J7L_304
- Geometric discrepancy: 0.1372
- The information below is about IL_5J7L_304
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.4
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
3JBU|1|b|G|1651
3JBU|1|b|A|1652
3JBU|1|b|G|1653
3JBU|1|b|A|1654
3JBU|1|b|A|1655
3JBU|1|b|C|1656
*
3JBU|1|b|G|2004
3JBU|1|b|A|2005
3JBU|1|b|C|2006
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain n
- 50S ribosomal protein L17
Coloring options: