IL_3JBU_109

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGUGAA*UCCACC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|G|1660
3JBU|1|b|G|1661
3JBU|1|b|U|1662
3JBU|1|b|G|1663
3JBU|1|b|A|1664
3JBU|1|b|A|1665
*
3JBU|1|b|U|1995
3JBU|1|b|C|1996
3JBU|1|b|C|1997
3JBU|1|b|A|1998
3JBU|1|b|C|1999
3JBU|1|b|C|2000

Current chains

Chain b

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain k

50S ribosomal protein L14

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19