3D structure

PDB id
3JBU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Experimental method
ELECTRON MICROSCOPY
Resolution
3.64 Å

Loop

Sequence
AACC*GGUACU
Length
10 nucleotides
Bulged bases
3JBU|1|b|A|2439
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JBU|1|b|A|2070
3JBU|1|b|A|2071
3JBU|1|b|C|2072
3JBU|1|b|C|2073
*
3JBU|1|b|G|2436
3JBU|1|b|G|2437
3JBU|1|b|U|2438
3JBU|1|b|A|2439
3JBU|1|b|C|2440
3JBU|1|b|U|2441

Current chains

Chain b
23S rRNA

Nearby chains

Chain c
50S ribosomal protein L2
Chain v
Transfer RNA; tRNA
Chain z
SecM-glycine

Coloring options:

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