IL_3JBU_130

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

UUGAUGUGUAGGAUAGG*CCCUUUAA

Length

25 nucleotides

Bulged bases

3JBU|1|b|U|2111, 3JBU|1|b|G|2112, 3JBU|1|b|U|2113, 3JBU|1|b|A|2114, 3JBU|1|b|G|2115

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|U|2105
3JBU|1|b|U|2106
3JBU|1|b|G|2107
3JBU|1|b|A|2108
3JBU|1|b|U|2109
3JBU|1|b|G|2110
3JBU|1|b|U|2111
3JBU|1|b|G|2112
3JBU|1|b|U|2113
3JBU|1|b|A|2114
3JBU|1|b|G|2115
3JBU|1|b|G|2116
3JBU|1|b|A|2117
3JBU|1|b|U|2118
3JBU|1|b|A|2119
3JBU|1|b|G|2120
3JBU|1|b|G|2121
*
3JBU|1|b|C|2177
3JBU|1|b|C|2178
3JBU|1|b|C|2179
3JBU|1|b|U|2180
3JBU|1|b|U|2181
3JBU|1|b|U|2182
3JBU|1|b|A|2183
3JBU|1|b|A|2184

Current chains

Chain b

23S rRNA

Nearby chains