IL_3JBU_144

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GAACGUC*GACAGUUC

Length

15 nucleotides

Bulged bases

3JBU|1|b|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|G|2588
3JBU|1|b|A|2589
3JBU|1|b|A|2590
3JBU|1|b|C|2591
3JBU|1|b|G|2592
3JBU|1|b|U|2593
3JBU|1|b|C|2594
*
3JBU|1|b|G|2599
3JBU|1|b|A|2600
3JBU|1|b|C|2601
3JBU|1|b|A|2602
3JBU|1|b|G|2603
3JBU|1|b|U|2604
3JBU|1|b|U|2605
3JBU|1|b|C|2606

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2

Chain v

Transfer RNA; tRNA