IL_3JBU_153

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GUGUAAGC*GUUGAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|G|2846
3JBU|1|b|U|2847
3JBU|1|b|G|2848
3JBU|1|b|U|2849
3JBU|1|b|A|2850
3JBU|1|b|A|2851
3JBU|1|b|G|2852
3JBU|1|b|C|2853
*
3JBU|1|b|G|2864
3JBU|1|b|U|2865
3JBU|1|b|U|2866
3JBU|1|b|G|2867
3JBU|1|b|A|2868
3JBU|1|b|G|2869
3JBU|1|b|C|2870

Current chains

Chain b

23S rRNA

Nearby chains

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19