IL_3JBU_158

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGGAGGAAGGGAGUA*UGCUCAUUGACGUUACCC

Length

33 nucleotides

Bulged bases

3JBU|1|A|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|445
3JBU|1|A|G|446
3JBU|1|A|G|447
3JBU|1|A|A|448
3JBU|1|A|G|449
3JBU|1|A|G|450
3JBU|1|A|A|451
3JBU|1|A|A|452
3JBU|1|A|G|453
3JBU|1|A|G|454
3JBU|1|A|G|455
3JBU|1|A|A|456
3JBU|1|A|G|457
3JBU|1|A|U|458
3JBU|1|A|A|459
*
3JBU|1|A|U|473
3JBU|1|A|G|474
3JBU|1|A|C|475
3JBU|1|A|U|476
3JBU|1|A|C|477
3JBU|1|A|A|478
3JBU|1|A|U|479
3JBU|1|A|U|480
3JBU|1|A|G|481
3JBU|1|A|A|482
3JBU|1|A|C|483
3JBU|1|A|G|484
3JBU|1|A|U|485
3JBU|1|A|U|486
3JBU|1|A|A|487
3JBU|1|A|C|488
3JBU|1|A|C|489
3JBU|1|A|C|490

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain P

30S ribosomal protein S16