IL_3JBU_160

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GCACGCAG*UCAGGUGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|577
3JBU|1|A|C|578
3JBU|1|A|A|579
3JBU|1|A|C|580
3JBU|1|A|G|581
3JBU|1|A|C|582
3JBU|1|A|A|583
3JBU|1|A|G|584
*
3JBU|1|A|U|757
3JBU|1|A|C|758
3JBU|1|A|A|759
3JBU|1|A|G|760
3JBU|1|A|G|761
3JBU|1|A|U|762
3JBU|1|A|G|763
3JBU|1|A|C|764

Current chains

Chain A

16S rRNA

Nearby chains

Chain H

30S ribosomal protein S8

Chain L

30S ribosomal protein S12

Chain O

30S ribosomal protein S15

Chain Q

30S ribosomal protein S17

Chain b

Large subunit ribosomal RNA; LSU rRNA