IL_3JBU_169

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

CCGCA*UUCCCGG

Length

12 nucleotides

Bulged bases

3JBU|1|A|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|C|931
3JBU|1|A|C|932
3JBU|1|A|G|933
3JBU|1|A|C|934
3JBU|1|A|A|935
*
3JBU|1|A|U|1380
3JBU|1|A|U|1381
3JBU|1|A|C|1382
3JBU|1|A|C|1383
3JBU|1|A|C|1384
3JBU|1|A|G|1385
3JBU|1|A|G|1386

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S5

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9

Chain v

Transfer RNA; tRNA