IL_3JBU_170

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGUGCUGCA*UGGCCC

Length

15 nucleotides

Bulged bases

3JBU|1|A|U|1049, 3JBU|1|A|G|1053, 3JBU|1|A|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|A|G|1047
3JBU|1|A|G|1048
3JBU|1|A|U|1049
3JBU|1|A|G|1050
3JBU|1|A|C|1051
3JBU|1|A|U|1052
3JBU|1|A|G|1053
3JBU|1|A|C|1054
3JBU|1|A|A|1055
*
3JBU|1|A|U|1205
3JBU|1|A|G|1206
3JBU|1|A|G|1207
3JBU|1|A|C|1208
3JBU|1|A|C|1209
3JBU|1|A|C|1210

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain N

30S ribosomal protein S14

Chain X

mRNA