IL_3JBU_172
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- CAUACAAAGAGAAG*CGGACCUCAUAAAGUG
- Length
- 30 nucleotides
- Bulged bases
- 3JBU|1|A|A|1257, 3JBU|1|A|A|1280, 3JBU|1|A|C|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBU|1|A|C|1245
3JBU|1|A|A|1246
3JBU|1|A|U|1247
3JBU|1|A|A|1248
3JBU|1|A|C|1249
3JBU|1|A|A|1250
3JBU|1|A|A|1251
3JBU|1|A|A|1252
3JBU|1|A|G|1253
3JBU|1|A|A|1254
3JBU|1|A|G|1255
3JBU|1|A|A|1256
3JBU|1|A|A|1257
3JBU|1|A|G|1258
*
3JBU|1|A|C|1277
3JBU|1|A|G|1278
3JBU|1|A|G|1279
3JBU|1|A|A|1280
3JBU|1|A|C|1281
3JBU|1|A|C|1282
3JBU|1|A|U|1283
3JBU|1|A|C|1284
3JBU|1|A|A|1285
3JBU|1|A|U|1286
3JBU|1|A|A|1287
3JBU|1|A|A|1288
3JBU|1|A|A|1289
3JBU|1|A|G|1290
3JBU|1|A|U|1291
3JBU|1|A|G|1292
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14
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