IL_3JBU_177

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GUGAA*UAUCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|G|841
3JBU|1|b|U|842
3JBU|1|b|G|843
3JBU|1|b|A|844
3JBU|1|b|A|845
*
3JBU|1|b|U|932
3JBU|1|b|A|933
3JBU|1|b|U|934
3JBU|1|b|C|935
3JBU|1|b|A|936
3JBU|1|b|C|937

Current chains

Chain b

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L30

Chain 7

50S ribosomal protein L35