IL_3JBU_186

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

UUGGUGUUACUGC*GCAUCAGGUAACAUCAA

Length

30 nucleotides

Bulged bases

3JBU|1|b|U|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|U|1405
3JBU|1|b|U|1406
3JBU|1|b|G|1407
3JBU|1|b|G|1408
3JBU|1|b|U|1409
3JBU|1|b|G|1410
3JBU|1|b|U|1411
3JBU|1|b|U|1412
3JBU|1|b|A|1413
3JBU|1|b|C|1414
3JBU|1|b|U|1415
3JBU|1|b|G|1416
3JBU|1|b|C|1417
*
3JBU|1|b|G|1581
3JBU|1|b|C|1582
3JBU|1|b|A|1583
3JBU|1|b|U|1584
3JBU|1|b|C|1585
3JBU|1|b|A|1586
3JBU|1|b|G|1587
3JBU|1|b|G|1588
3JBU|1|b|U|1589
3JBU|1|b|A|1590
3JBU|1|b|A|1591
3JBU|1|b|C|1592
3JBU|1|b|A|1593
3JBU|1|b|U|1594
3JBU|1|b|C|1595
3JBU|1|b|A|1596
3JBU|1|b|A|1597

Current chains

Chain b

23S rRNA

Nearby chains

Chain t

50S ribosomal protein L23