IL_3JBU_188

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GAGAAG*CCUGCUU

Length

13 nucleotides

Bulged bases

3JBU|1|b|U|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|G|1430
3JBU|1|b|A|1431
3JBU|1|b|G|1432
3JBU|1|b|A|1433
3JBU|1|b|A|1434
3JBU|1|b|G|1435
*
3JBU|1|b|C|1557
3JBU|1|b|C|1558
3JBU|1|b|U|1559
3JBU|1|b|G|1560
3JBU|1|b|C|1561
3JBU|1|b|U|1562
3JBU|1|b|U|1563

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2