IL_3JBU_197
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GUUGAC*GUUGC
- Length
- 11 nucleotides
- Bulged bases
- 3JBU|1|b|U|2203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBU_197 not in the Motif Atlas
- Geometric match to IL_6CZR_167
- Geometric discrepancy: 0.3143
- The information below is about IL_6CZR_167
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
3JBU|1|b|G|2201
3JBU|1|b|U|2202
3JBU|1|b|U|2203
3JBU|1|b|G|2204
3JBU|1|b|A|2205
3JBU|1|b|C|2206
*
3JBU|1|b|G|2218
3JBU|1|b|U|2219
3JBU|1|b|U|2220
3JBU|1|b|G|2221
3JBU|1|b|C|2222
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain c
- 50S ribosomal protein L2
- Chain h
- 50S ribosomal protein L9
Coloring options: