IL_3JBU_221

3D structure

PDB id

3JBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.64 Å

Loop

Sequence

GGGACG*CCAGGAAAAGC

Length

17 nucleotides

Bulged bases

3JBU|1|b|A|1566

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBU|1|b|G|1424
3JBU|1|b|G|1425
3JBU|1|b|G|1426
3JBU|1|b|A|1427
3JBU|1|b|C|1428
3JBU|1|b|G|1429
*
3JBU|1|b|C|1564
3JBU|1|b|C|1565
3JBU|1|b|A|1566
3JBU|1|b|G|1567
3JBU|1|b|G|1568
3JBU|1|b|A|1569
3JBU|1|b|A|1570
3JBU|1|b|A|1571
3JBU|1|b|A|1572
3JBU|1|b|G|1573
3JBU|1|b|C|1574

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2