IL_3JBV_012

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

GGAUAACU*AGCUAAUAC

Length

17 nucleotides

Bulged bases

3JBV|1|A|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|A|G|147
3JBV|1|A|G|148
3JBV|1|A|A|149
3JBV|1|A|U|150
3JBV|1|A|A|151
3JBV|1|A|A|152
3JBV|1|A|C|153
3JBV|1|A|U|154
*
3JBV|1|A|A|167
3JBV|1|A|G|168
3JBV|1|A|C|169
3JBV|1|A|U|170
3JBV|1|A|A|171
3JBV|1|A|A|172
3JBV|1|A|U|173
3JBV|1|A|A|174
3JBV|1|A|C|175

Current chains

Chain A

RNA (1530-MER)

Nearby chains

Chain T

30S ribosomal protein S20