IL_3JBV_017

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

AUGAAGAAG*UGUAAAGU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|A|A|408
3JBV|1|A|U|409
3JBV|1|A|G|410
3JBV|1|A|A|411
3JBV|1|A|A|412
3JBV|1|A|G|413
3JBV|1|A|A|414
3JBV|1|A|A|415
3JBV|1|A|G|416
*
3JBV|1|A|U|427
3JBV|1|A|G|428
3JBV|1|A|U|429
3JBV|1|A|A|430
3JBV|1|A|A|431
3JBV|1|A|A|432
3JBV|1|A|G|433
3JBV|1|A|U|434

Current chains

Chain A

RNA (1530-MER)

Nearby chains

Chain D

30S ribosomal protein S4