IL_3JBV_021

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

GGAGUAAAG*CUUUGCUCAU

Length

19 nucleotides

Bulged bases

3JBV|1|A|A|461

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|A|G|454
3JBV|1|A|G|455
3JBV|1|A|A|456
3JBV|1|A|G|457
3JBV|1|A|U|458
3JBV|1|A|A|459
3JBV|1|A|A|460
3JBV|1|A|A|461
3JBV|1|A|G|462
*
3JBV|1|A|C|470
3JBV|1|A|U|471
3JBV|1|A|U|472
3JBV|1|A|U|473
3JBV|1|A|G|474
3JBV|1|A|C|475
3JBV|1|A|U|476
3JBV|1|A|C|477
3JBV|1|A|A|478
3JBV|1|A|U|479

Current chains

Chain A

RNA (1530-MER)

Nearby chains

Chain P

30S ribosomal protein S16