IL_3JBV_057
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBV_057 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.3351
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
3JBV|1|A|C|1407
3JBV|1|A|A|1408
3JBV|1|A|C|1409
*
3JBV|1|A|G|1491
3JBV|1|A|A|1492
3JBV|1|A|A|1493
3JBV|1|A|G|1494
Current chains
- Chain A
- RNA (1530-MER)
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain V
- Transfer RNA; tRNA
- Chain X
- RNA (5'-R(P*CP*UP*GP*GP*CP*CP*CP*UP*CP*AP*A)-3')
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: