IL_3JBV_071
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 3JBV|1|b|U|100, 3JBV|1|b|A|101, 3JBV|1|b|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBV_071 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.4412
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
3JBV|1|b|G|81
3JBV|1|b|U|82
3JBV|1|b|A|83
3JBV|1|b|A|84
3JBV|1|b|G|85
*
3JBV|1|b|C|97
3JBV|1|b|G|98
3JBV|1|b|U|99
3JBV|1|b|U|100
3JBV|1|b|A|101
3JBV|1|b|U|102
3JBV|1|b|A|103
3JBV|1|b|A|104
3JBV|1|b|C|105
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain u
- 50S ribosomal protein L24
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