IL_3JBV_075

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JBV_075 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.4171

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

3JBV|1|b|C|269
3JBV|1|b|A|270
3JBV|1|b|G|271
*
3JBV|1|b|C|366
3JBV|1|b|G|367
3JBV|1|b|A|368
3JBV|1|b|U|369
3JBV|1|b|G|370

Current chains

Chain b

RNA (2903-MER)

Nearby chains