3D structure

PDB id
3JBV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Experimental method
ELECTRON MICROSCOPY
Resolution
3.32 Å

Loop

Sequence
CCGAAAC*GAGAUAGCUG
Length
17 nucleotides
Bulged bases
3JBV|1|b|G|801, 3JBV|1|b|G|805
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JBV|1|b|C|672
3JBV|1|b|C|673
3JBV|1|b|G|674
3JBV|1|b|A|675
3JBV|1|b|A|676
3JBV|1|b|A|677
3JBV|1|b|C|678
*
3JBV|1|b|G|799
3JBV|1|b|A|800
3JBV|1|b|G|801
3JBV|1|b|A|802
3JBV|1|b|U|803
3JBV|1|b|A|804
3JBV|1|b|G|805
3JBV|1|b|C|806
3JBV|1|b|U|807
3JBV|1|b|G|808

Current chains

Chain b
RNA (2903-MER)

Nearby chains

Chain e
50S ribosomal protein L3
Chain l
50S ribosomal protein L15

Coloring options:

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