IL_3JBV_099

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

GUUAAGUG*CUAAAC

Length

14 nucleotides

Bulged bases

3JBV|1|b|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|G|1017
3JBV|1|b|U|1018
3JBV|1|b|U|1019
3JBV|1|b|A|1020
3JBV|1|b|A|1021
3JBV|1|b|G|1022
3JBV|1|b|U|1023
3JBV|1|b|G|1024
*
3JBV|1|b|C|1140
3JBV|1|b|U|1141
3JBV|1|b|A|1142
3JBV|1|b|A|1143
3JBV|1|b|A|1144
3JBV|1|b|C|1145

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain 8

50S ribosomal protein L36

Chain g

50S ribosomal protein L5

Chain j

50S ribosomal protein L13