IL_3JBV_105

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

UGUAAGC*GUAUCA

Length

13 nucleotides

Bulged bases

3JBV|1|b|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|U|1201
3JBV|1|b|G|1202
3JBV|1|b|U|1203
3JBV|1|b|A|1204
3JBV|1|b|A|1205
3JBV|1|b|G|1206
3JBV|1|b|C|1207
*
3JBV|1|b|G|1239
3JBV|1|b|U|1240
3JBV|1|b|A|1241
3JBV|1|b|U|1242
3JBV|1|b|C|1243
3JBV|1|b|A|1244

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain e

50S ribosomal protein L3

Chain l

50S ribosomal protein L15

Chain q

50S ribosomal protein L20