IL_3JBV_119

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

UUUUCCAG*CGGAAAA

Length

15 nucleotides

Bulged bases

3JBV|1|b|A|1490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|U|1484
3JBV|1|b|U|1485
3JBV|1|b|U|1486
3JBV|1|b|U|1487
3JBV|1|b|C|1488
3JBV|1|b|C|1489
3JBV|1|b|A|1490
3JBV|1|b|G|1491
*
3JBV|1|b|C|1499
3JBV|1|b|G|1500
3JBV|1|b|G|1501
3JBV|1|b|A|1502
3JBV|1|b|A|1503
3JBV|1|b|A|1504
3JBV|1|b|A|1505

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain c

50S ribosomal protein L2