IL_3JBV_151
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBV_151 not in the Motif Atlas
- Homologous match to IL_5J7L_338
- Geometric discrepancy: 0.2769
- The information below is about IL_5J7L_338
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
3JBV|1|b|C|2466
3JBV|1|b|C|2467
3JBV|1|b|A|2468
3JBV|1|b|A|2469
3JBV|1|b|G|2470
*
3JBV|1|b|C|2480
3JBV|1|b|G|2481
3JBV|1|b|A|2482
3JBV|1|b|C|2483
3JBV|1|b|G|2484
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain m
- 50S ribosomal protein L16
Coloring options: