IL_3JBV_166
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- GGUG*CUAAC
- Length
- 9 nucleotides
- Bulged bases
- 3JBV|1|b|A|2872, 3JBV|1|b|A|2873
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBV_166 not in the Motif Atlas
- Homologous match to IL_5J7L_353
- Geometric discrepancy: 0.143
- The information below is about IL_5J7L_353
- Detailed Annotation
- Multiple bulged bases with non-canonical cWW
- Broad Annotation
- Multiple bulged bases with non-canonical cWW
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
3JBV|1|b|G|2843
3JBV|1|b|G|2844
3JBV|1|b|U|2845
3JBV|1|b|G|2846
*
3JBV|1|b|C|2870
3JBV|1|b|U|2871
3JBV|1|b|A|2872
3JBV|1|b|A|2873
3JBV|1|b|C|2874
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain n
- 50S ribosomal protein L17
- Chain p
- 50S ribosomal protein L19
Coloring options: