IL_3JBV_184
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- UGGC*GUCAUCA
- Length
- 11 nucleotides
- Bulged bases
- 3JBV|1|A|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBV_184 not in the Motif Atlas
- Geometric match to IL_5J7L_010
- Geometric discrepancy: 0.3625
- The information below is about IL_5J7L_010
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- Minor groove platform related
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
3JBV|1|A|U|1056
3JBV|1|A|G|1057
3JBV|1|A|G|1058
3JBV|1|A|C|1059
*
3JBV|1|A|G|1198
3JBV|1|A|U|1199
3JBV|1|A|C|1200
3JBV|1|A|A|1201
3JBV|1|A|U|1202
3JBV|1|A|C|1203
3JBV|1|A|A|1204
Current chains
- Chain A
- RNA (1530-MER)
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
- Chain V
- Transfer RNA; tRNA
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