3D structure

PDB id
3JBV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Experimental method
ELECTRON MICROSCOPY
Resolution
3.32 Å

Loop

Sequence
GUGAAUUCAUCUC*GAGAAUGUUAUCAC
Length
27 nucleotides
Bulged bases
3JBV|1|b|U|846, 3JBV|1|b|U|931
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JBV|1|b|G|841
3JBV|1|b|U|842
3JBV|1|b|G|843
3JBV|1|b|A|844
3JBV|1|b|A|845
3JBV|1|b|U|846
3JBV|1|b|U|847
3JBV|1|b|C|848
3JBV|1|b|A|849
3JBV|1|b|U|850
3JBV|1|b|C|851
3JBV|1|b|U|852
3JBV|1|b|C|853
*
3JBV|1|b|G|924
3JBV|1|b|A|925
3JBV|1|b|G|926
3JBV|1|b|A|927
3JBV|1|b|A|928
3JBV|1|b|U|929
3JBV|1|b|G|930
3JBV|1|b|U|931
3JBV|1|b|U|932
3JBV|1|b|A|933
3JBV|1|b|U|934
3JBV|1|b|C|935
3JBV|1|b|A|936
3JBV|1|b|C|937

Current chains

Chain b
RNA (2903-MER)

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain y
50S ribosomal protein L27

Coloring options:

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