IL_3JBV_199

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

CUAAGGCGAGG*CGUAGUCGAUG

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|C|1351
3JBV|1|b|U|1352
3JBV|1|b|A|1353
3JBV|1|b|A|1354
3JBV|1|b|G|1355
3JBV|1|b|G|1356
3JBV|1|b|C|1357
3JBV|1|b|G|1358
3JBV|1|b|A|1359
3JBV|1|b|G|1360
3JBV|1|b|G|1361
*
3JBV|1|b|C|1370
3JBV|1|b|G|1371
3JBV|1|b|U|1372
3JBV|1|b|A|1373
3JBV|1|b|G|1374
3JBV|1|b|U|1375
3JBV|1|b|C|1376
3JBV|1|b|G|1377
3JBV|1|b|A|1378
3JBV|1|b|U|1379
3JBV|1|b|G|1380

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain 6

50S ribosomal protein L34

Chain c

50S ribosomal protein L2