IL_3JBV_200

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

UGGUGUUACUGC*GCAUCAGGUAACAUCA

Length

28 nucleotides

Bulged bases

3JBV|1|b|U|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|U|1406
3JBV|1|b|G|1407
3JBV|1|b|G|1408
3JBV|1|b|U|1409
3JBV|1|b|G|1410
3JBV|1|b|U|1411
3JBV|1|b|U|1412
3JBV|1|b|A|1413
3JBV|1|b|C|1414
3JBV|1|b|U|1415
3JBV|1|b|G|1416
3JBV|1|b|C|1417
*
3JBV|1|b|G|1581
3JBV|1|b|C|1582
3JBV|1|b|A|1583
3JBV|1|b|U|1584
3JBV|1|b|C|1585
3JBV|1|b|A|1586
3JBV|1|b|G|1587
3JBV|1|b|G|1588
3JBV|1|b|U|1589
3JBV|1|b|A|1590
3JBV|1|b|A|1591
3JBV|1|b|C|1592
3JBV|1|b|A|1593
3JBV|1|b|U|1594
3JBV|1|b|C|1595
3JBV|1|b|A|1596

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain t

50S ribosomal protein L23