IL_3JBV_210
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- AGCCUUGAUGUGUAGGAUAGGUGGGAG*CGACCUUGAAAUACCACCCUUUAAUGUU
- Length
- 55 nucleotides
- Bulged bases
- 3JBV|1|b|U|2111, 3JBV|1|b|G|2112, 3JBV|1|b|U|2113, 3JBV|1|b|A|2114, 3JBV|1|b|G|2115, 3JBV|1|b|G|2116, 3JBV|1|b|A|2117, 3JBV|1|b|U|2118, 3JBV|1|b|G|2123, 3JBV|1|b|G|2124, 3JBV|1|b|G|2162, 3JBV|1|b|A|2163, 3JBV|1|b|A|2169, 3JBV|1|b|A|2171, 3JBV|1|b|U|2172, 3JBV|1|b|A|2173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|b|A|2101
3JBV|1|b|G|2102
3JBV|1|b|C|2103
3JBV|1|b|C|2104
3JBV|1|b|U|2105
3JBV|1|b|U|2106
3JBV|1|b|G|2107
3JBV|1|b|A|2108
3JBV|1|b|U|2109
3JBV|1|b|G|2110
3JBV|1|b|U|2111
3JBV|1|b|G|2112
3JBV|1|b|U|2113
3JBV|1|b|A|2114
3JBV|1|b|G|2115
3JBV|1|b|G|2116
3JBV|1|b|A|2117
3JBV|1|b|U|2118
3JBV|1|b|A|2119
3JBV|1|b|G|2120
3JBV|1|b|G|2121
3JBV|1|b|U|2122
3JBV|1|b|G|2123
3JBV|1|b|G|2124
3JBV|1|b|G|2125
3JBV|1|b|A|2126
3JBV|1|b|G|2127
*
3JBV|1|b|C|2161
3JBV|1|b|G|2162
3JBV|1|b|A|2163
3JBV|1|b|C|2164
3JBV|1|b|C|2165
3JBV|1|b|U|2166
3JBV|1|b|U|2167
3JBV|1|b|G|2168
3JBV|1|b|A|2169
3JBV|1|b|A|2170
3JBV|1|b|A|2171
3JBV|1|b|U|2172
3JBV|1|b|A|2173
3JBV|1|b|C|2174
3JBV|1|b|C|2175
3JBV|1|b|A|2176
3JBV|1|b|C|2177
3JBV|1|b|C|2178
3JBV|1|b|C|2179
3JBV|1|b|U|2180
3JBV|1|b|U|2181
3JBV|1|b|U|2182
3JBV|1|b|A|2183
3JBV|1|b|A|2184
3JBV|1|b|U|2185
3JBV|1|b|G|2186
3JBV|1|b|U|2187
3JBV|1|b|U|2188
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain W
- Transfer RNA; tRNA
Coloring options: