IL_3JBV_216

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

GUGUUC*GGUAGC

Length

12 nucleotides

Bulged bases

3JBV|1|b|U|2689, 3JBV|1|b|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|G|2686
3JBV|1|b|U|2687
3JBV|1|b|G|2688
3JBV|1|b|U|2689
3JBV|1|b|U|2690
3JBV|1|b|C|2691
*
3JBV|1|b|G|2718
3JBV|1|b|G|2719
3JBV|1|b|U|2720
3JBV|1|b|A|2721
3JBV|1|b|G|2722
3JBV|1|b|C|2723

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain d

50S ribosomal protein L11

Chain k

50S ribosomal protein L14

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19