IL_3JBV_232

3D structure

PDB id

3JBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps

Experimental method

ELECTRON MICROSCOPY

Resolution

3.32 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

3JBV|1|b|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JBV|1|b|C|1043
3JBV|1|b|C|1044
3JBV|1|b|C|1045
3JBV|1|b|A|1046
3JBV|1|b|G|1047
3JBV|1|b|A|1048
3JBV|1|b|C|1049
3JBV|1|b|A|1050
3JBV|1|b|G|1051
3JBV|1|b|C|1052
*
3JBV|1|b|G|1107
3JBV|1|b|U|1108
3JBV|1|b|C|1109
3JBV|1|b|G|1110
3JBV|1|b|A|1111
3JBV|1|b|G|1112

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain g

50S ribosomal protein L5