IL_3JCE_010

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JCE_010 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3286

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

3JCE|1|A|C|274
3JCE|1|A|C|275
3JCE|1|A|U|276
3JCE|1|A|G|277
3JCE|1|A|A|278
3JCE|1|A|A|279
3JCE|1|A|U|280
3JCE|1|A|C|281
*
3JCE|1|A|G|359
3JCE|1|A|U|360
3JCE|1|A|G|361
3JCE|1|A|A|362
3JCE|1|A|G|363

Current chains

Chain A

23 ribosomal RNA

Nearby chains