3D structure

PDB id
3JCE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GC*GCAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3JCE_072 not in the Motif Atlas
Geometric match to IL_7RQB_076
Geometric discrepancy: 0.1208
The information below is about IL_7RQB_076
Detailed Annotation
Bulged stacked bases
Broad Annotation
Bulged stacked bases
Motif group
IL_59677.2
Basepair signature
cWW-cWW
Number of instances in this motif group
19

Unit IDs

3JCE|1|A|G|1933
3JCE|1|A|C|1934
*
3JCE|1|A|G|1964
3JCE|1|A|C|1965
3JCE|1|A|A|1966
3JCE|1|A|C|1967

Current chains

Chain A
23 ribosomal RNA

Nearby chains

Chain 8
Transfer RNA; tRNA
Chain x
Elongation factor 4

Coloring options:


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