IL_3JCE_082

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGUAGGAUAGGUGG*CCACCC

Length

21 nucleotides

Bulged bases

3JCE|1|A|U|2111, 3JCE|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|A|G|2110
3JCE|1|A|U|2111
3JCE|1|A|G|2112
3JCE|1|A|U|2113
3JCE|1|A|A|2114
3JCE|1|A|G|2115
3JCE|1|A|G|2116
3JCE|1|A|A|2117
3JCE|1|A|U|2118
3JCE|1|A|A|2119
3JCE|1|A|G|2120
3JCE|1|A|G|2121
3JCE|1|A|U|2122
3JCE|1|A|G|2123
3JCE|1|A|G|2124
*
3JCE|1|A|C|2174
3JCE|1|A|C|2175
3JCE|1|A|A|2176
3JCE|1|A|C|2177
3JCE|1|A|C|2178
3JCE|1|A|C|2179

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L1

Chain 9

Transfer RNA; tRNA