IL_3JCE_122

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGACC*GGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JCE_122 not in the Motif Atlas

Homologous match to IL_5J7L_013

Geometric discrepancy: 0.5951

The information below is about IL_5J7L_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66997.2

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

3JCE|1|a|G|203
3JCE|1|a|G|204
3JCE|1|a|A|205
3JCE|1|a|C|206
3JCE|1|a|C|207
*
3JCE|1|a|G|212
3JCE|1|a|G|213
3JCE|1|a|C|214

Current chains

Chain a

16S ribosomal RNA

Nearby chains