IL_3JCE_196
3D structure
- PDB id
- 3JCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAGUU*AAUGUGCCUUCGGGAAC
- Length
- 23 nucleotides
- Bulged bases
- 3JCE|1|a|U|1030, 3JCE|1|a|C|1031
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCE_196 not in the Motif Atlas
- Homologous match to IL_5J7L_045
- Geometric discrepancy: 0.5454
- The information below is about IL_5J7L_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_13394.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
- Number of instances in this motif group
- 1
Unit IDs
3JCE|1|a|G|1003
3JCE|1|a|A|1004
3JCE|1|a|A|1005
3JCE|1|a|G|1006
3JCE|1|a|U|1007
3JCE|1|a|U|1008
*
3JCE|1|a|A|1021
3JCE|1|a|A|1022
3JCE|1|a|U|1023
3JCE|1|a|G|1024
3JCE|1|a|U|1025
3JCE|1|a|G|1026
3JCE|1|a|C|1027
3JCE|1|a|C|1028
3JCE|1|a|U|1029
3JCE|1|a|U|1030
3JCE|1|a|C|1031
3JCE|1|a|G|1032
3JCE|1|a|G|1033
3JCE|1|a|G|1034
3JCE|1|a|A|1035
3JCE|1|a|A|1036
3JCE|1|a|C|1037
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
Coloring options: